Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_41920 | P55573 | Negative | 9109962 - 9110933 | 34182.3 |
| hypothetical protein | APR52_41925 | Not Available | Negative | 9111005 - 9111892 | 31979.3 |
| asnc family transcriptional regulator | APR52_41930 | Not Available | Negative | 9111889 - 9112638 | 28734.8 |
| glutamate-1-semialdehyde 2,1-aminomutase | APR52_41935 | D2D3B2 | Negative | 9112723 - 9113952 | 43847.0 |
| porin | APR52_41940 | Not Available | Negative | 9114110 - 9115348 | 42680.3 |
| hypothetical protein | APR52_41945 | P0ACR6 | Negative | 9115476 - 9116375 | 31900.5 |
| hypothetical protein | APR52_41950 | Not Available | Negative | 9116461 - 9117459 | 34844.7 |
| hypothetical protein | APR52_41955 | Not Available | Negative | 9117530 - 9117841 | 11624.9 |
| 3-methylaspartate ammonia-lyase glutamate mutase | APR52_41960 | Not Available | Negative | 9117838 - 9119214 | 49227.3 |
| hydroxyacid dehydrogenase | APR52_41965 | O33116 | Negative | 9119228 - 9120247 | 35743.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
