Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-70 | APR52_41870 | Not Available | Positive | 9087541 - 9088053 | 19481.5 |
| hypothetical protein | APR52_41875 | Not Available | Positive | 9088144 - 9089139 | 35267.1 |
| hypothetical protein | APR52_41880 | Not Available | Positive | 9089333 - 9100645 | 385898.0 |
| hypothetical protein | APR52_41885 | Not Available | Positive | 9100748 - 9101347 | 22238.6 |
| peptide abc transporter atp-binding protein | APR52_41890 | Not Available | Negative | 9101443 - 9102525 | 39160.7 |
| peptide abc transporter permease | APR52_41895 | Q53192 | Negative | 9102536 - 9103411 | 30991.1 |
| peptide abc transporter | APR52_41900 | Q53191 | Negative | 9103422 - 9104357 | 33906.8 |
| peptide abc transporter permease | APR52_41905 | A0A0H2ZGV7 | Negative | 9104370 - 9105971 | 58564.4 |
| hypothetical protein | APR52_41910 | P15558 | Negative | 9106179 - 9108449 | 83082.9 |
| amidase | APR52_41915 | Not Available | Negative | 9108508 - 9109965 | 52925.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
