Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_41815 | Not Available | Negative | 9071664 - 9072272 | 21685.5 |
| atp-dependent dna helicase | APR52_41820 | P30015 | Negative | 9072389 - 9076753 | 158084.0 |
| hypothetical protein | APR52_41830 | Not Available | Negative | 9079141 - 9079992 | 31692.9 |
| metallophosphoesterase | APR52_41835 | Not Available | Positive | 9080126 - 9080902 | 27660.1 |
| gntr family transcriptional regulator | APR52_41840 | Not Available | Negative | 9080921 - 9081652 | 26809.3 |
| 3-carboxy-cis,cis-muconate cycloisomerase | APR52_41845 | O42889 | Positive | 9081746 - 9083122 | 49581.2 |
| sodium:dicarboxylate symporter | APR52_41850 | A1TSW8 | Positive | 9083147 - 9084502 | 47453.1 |
| fumarate hydratase | APR52_41855 | Q8YB50 | Positive | 9084507 - 9085931 | 50274.5 |
| glutathione s-transferase | APR52_41860 | P77526 | Negative | 9085897 - 9086601 | 26200.7 |
| hypothetical protein | APR52_41865 | Not Available | Positive | 9086816 - 9087544 | 25528.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
