Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | APR52_03485 | P45867 | Negative | 755866 - 757053 | 42197.8 |
| acyl dehydratase | APR52_03490 | Not Available | Negative | 757053 - 757523 | 17365.0 |
| hypothetical protein | APR52_03495 | Not Available | Negative | 757549 - 758331 | 28344.1 |
| butyryl-coa dehydrogenase | APR52_03500 | Not Available | Negative | 758373 - 759515 | 41739.9 |
| hypothetical protein | APR52_03505 | Not Available | Negative | 759523 - 760965 | 49979.5 |
| carnitinyl-coa dehydratase | APR52_03510 | A9MR28 | Negative | 760967 - 761728 | 27839.9 |
| hypothetical protein | APR52_03515 | P37671 | Negative | 761725 - 762594 | 30425.8 |
| acetoacetyl-coa synthetase | APR52_03520 | Q9JMI1 | Positive | 762760 - 764772 | 74342.9 |
| 1,4-dihydroxy-6-naphthoate synthase | APR52_03530 | Not Available | Positive | 765772 - 766554 | 28993.8 |
| acyl dehydratase | APR52_03535 | P77455 | Negative | 767173 - 767649 | 17484.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
