Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybutyrate dehydrogenase | APR52_41665 | Not Available | Negative | 9039491 - 9040630 | 39399.0 |
| enoyl-coa hydratase | APR52_41670 | P64017 | Positive | 9040905 - 9041684 | 27782.4 |
| coa-transferase | APR52_41675 | Not Available | Positive | 9041768 - 9042946 | 41737.3 |
| abc transporter substrate-binding protein | APR52_41680 | Not Available | Positive | 9042983 - 9043981 | 34678.8 |
| thioesterase | APR52_41685 | P55567 | Positive | 9044010 - 9044918 | 33210.1 |
| lysr family transcriptional regulator | APR52_41690 | Not Available | Negative | 9044906 - 9045832 | 34519.6 |
| lysr family transcriptional regulator | APR52_41695 | Not Available | Positive | 9046017 - 9046427 | 14690.5 |
| dna-binding protein | APR52_41700 | Not Available | Positive | 9046616 - 9047110 | 17248.9 |
| serine/threonine protein phosphatase | APR52_41705 | Not Available | Positive | 9047231 - 9048805 | 54750.4 |
| cytochrome b6 | APR52_41710 | Q51658 | Positive | 9048802 - 9050172 | 49097.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
