Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_41615 | Q9RRL7 | Negative | 9028875 - 9030824 | 69700.6 |
| 2-ketocyclohexanecarboxyl-coa hydrolase | APR52_41620 | Not Available | Negative | 9030849 - 9031661 | 28872.3 |
| aminotransferase | APR52_41625 | Not Available | Negative | 9031664 - 9033010 | 48899.5 |
| lysr family transcriptional regulator | APR52_41630 | Not Available | Positive | 9033187 - 9034104 | 33438.2 |
| hypothetical protein | APR52_41635 | Not Available | Positive | 9034139 - 9034627 | 17108.8 |
| l-dehydroascorbate transporter large permease subunit | APR52_41640 | P37675 | Negative | 9034653 - 9035930 | 44791.2 |
| amidohydrolase | APR52_41645 | P44994 | Negative | 9035959 - 9036462 | 17946.6 |
| amidohydrolase | APR52_41650 | Not Available | Negative | 9036504 - 9037436 | 34031.4 |
| hypothetical protein | APR52_41655 | Not Available | Negative | 9037433 - 9038425 | 35732.0 |
| laci family transcriptional regulator | APR52_41660 | Not Available | Negative | 9038483 - 9039460 | 34244.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
