Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_41560 | Q32LT9 | Negative | 9014640 - 9016115 | 52706.6 |
| 3-hydroxyacyl-coa dehydrogenase | APR52_41565 | Q6NYL3 | Negative | 9016138 - 9018240 | 75708.1 |
| abc transporter atp-binding protein | APR52_41570 | Not Available | Negative | 9018503 - 9019198 | 25568.2 |
| abc transporter atp-binding protein | APR52_41575 | Not Available | Negative | 9019200 - 9019976 | 27984.8 |
| abc transporter permease | APR52_41580 | Not Available | Negative | 9019980 - 9021290 | 47174.0 |
| abc transporter permease | APR52_41585 | Not Available | Negative | 9021295 - 9022248 | 33913.8 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_41590 | Not Available | Negative | 9022327 - 9023559 | 45046.7 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_41595 | Not Available | Negative | 9023760 - 9024989 | 44680.4 |
| long-chain fatty acid--coa ligase | APR52_41600 | Q00594 | Negative | 9025139 - 9026767 | 59803.0 |
| hypothetical protein | APR52_41605 | Not Available | Negative | 9026971 - 9028620 | 57708.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
