Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_41405 | Not Available | Positive | 8976234 - 8977190 | 36221.5 |
| peptide deformylase | APR52_41410 | Q7W0Q0 | Positive | 8977697 - 8978236 | 19804.8 |
| gntr family transcriptional regulator | APR52_41415 | Not Available | Negative | 8978243 - 8978632 | 13450.1 |
| amino acid abc transporter substrate-binding protein | APR52_41420 | Q52812 | Positive | 8978818 - 8979852 | 37064.0 |
| amino acid abc transporter permease | APR52_41425 | P45767 | Positive | 8979849 - 8980856 | 35741.2 |
| amino acid abc transporter permease | APR52_41430 | Not Available | Positive | 8980853 - 8981929 | 39513.2 |
| homoserine dehydrogenase | APR52_41435 | Not Available | Positive | 8982194 - 8983549 | 46773.8 |
| sodium:solute symporter | APR52_41440 | Not Available | Negative | 8983557 - 8985065 | 52311.0 |
| hypothetical protein | APR52_41445 | Not Available | Negative | 8985062 - 8985361 | 10755.9 |
| xre family transcriptional regulator | APR52_41450 | Not Available | Positive | 8985565 - 8986101 | 18915.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
