Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_41345 | Not Available | Positive | 8963784 - 8964029 | 8916.62 |
| hypothetical protein | APR52_41350 | Not Available | Negative | 8964278 - 8964463 | 7151.7 |
| hypothetical protein | APR52_41355 | Not Available | Negative | 8964899 - 8965666 | 27043.8 |
| hypothetical protein | APR52_41360 | Not Available | Positive | 8965860 - 8966804 | 32854.1 |
| short-chain dehydrogenase | APR52_41365 | Not Available | Positive | 8966809 - 8967603 | 27699.0 |
| acyl-coa dehydrogenase | APR52_41370 | Not Available | Positive | 8967600 - 8968757 | 41567.7 |
| hypothetical protein | APR52_41375 | Not Available | Positive | 8968754 - 8969680 | 32927.8 |
| coa-transferase | APR52_41380 | Not Available | Positive | 8969698 - 8970924 | 43603.2 |
| enoyl-coa hydratase | APR52_41385 | Not Available | Positive | 8970935 - 8971717 | 27476.7 |
| hypothetical protein | APR52_41390 | Not Available | Positive | 8972030 - 8972230 | 7161.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
