Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp synthase | APR52_03435 | P28643 | Negative | 741125 - 741883 | 26571.0 |
| hypothetical protein | APR52_03440 | Not Available | Positive | 742079 - 744418 | 83828.5 |
| hypothetical protein | APR52_03445 | Not Available | Positive | 744462 - 744902 | 15319.3 |
| thiolase | APR52_03450 | Not Available | Positive | 744899 - 746059 | 39566.7 |
| hypothetical protein | APR52_03455 | Not Available | Positive | 746056 - 746943 | 31887.7 |
| acetoacetyl-coa synthetase | APR52_03460 | A3QK15 | Positive | 746946 - 748967 | 75748.8 |
| methylcrotonoyl-coa carboxylase | APR52_03465 | Not Available | Negative | 749017 - 750516 | 52391.8 |
| methylcrotonoyl-coa carboxylase | APR52_03470 | I6YDK7 | Negative | 750548 - 752047 | 53317.2 |
| methylcrotonoyl-coa carboxylase | APR52_03475 | Not Available | Positive | 752238 - 753809 | 56407.7 |
| carbamoyl-phosphate synthase subunit l | APR52_03480 | Q5LUF3 | Positive | 753824 - 755827 | 70774.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
