Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase p | APR52_41190 | Q6FYW0 | Negative | 8924039 - 8925034 | 36393.7 |
| dna polymerase | APR52_41200 | P23072 | Positive | 8925847 - 8927787 | 72233.0 |
| aromatic compound catabolic protein | APR52_41205 | Not Available | Negative | 8927833 - 8928417 | 20768.1 |
| kinase | APR52_41210 | D4GYY1 | Positive | 8929019 - 8929873 | 32093.3 |
| abc transporter substrate-binding protein | APR52_41215 | O34805 | Positive | 8929985 - 8930845 | 30534.2 |
| nudix hydrolase | APR52_41220 | Not Available | Negative | 8930862 - 8932136 | 44953.3 |
| cysteine--trna ligase | APR52_41225 | Q39A07 | Negative | 8932174 - 8933556 | 51478.5 |
| hypothetical protein | APR52_41230 | Not Available | Negative | 8933739 - 8934176 | 15867.9 |
| magnesium chelatase | APR52_41235 | P9WPR2 | Negative | 8934410 - 8935486 | 36780.1 |
| cobalamin biosynthesis protein cobn | APR52_41240 | Q9HZQ3 | Negative | 8935483 - 8939295 | 137498.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
