Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease vii | APR52_41075 | A9BWI7 | Positive | 8898291 - 8899595 | 46745.2 |
| hypothetical protein | APR52_41085 | P05683 | Negative | 8902356 - 8903396 | 38473.9 |
| cobyrinic acid a,c-diamide synthase | APR52_41090 | P05682 | Negative | 8903398 - 8904522 | 40669.7 |
| hypothetical protein | APR52_41095 | Not Available | Positive | 8905257 - 8906603 | 49350.7 |
| hypothetical protein | APR52_41100 | Not Available | Positive | 8906889 - 8907194 | 11037.1 |
| dna-binding protein | APR52_41105 | P0A0Z0 | Negative | 8907455 - 8908009 | 19831.8 |
| hypothetical protein | APR52_41110 | Not Available | Negative | 8908483 - 8908893 | 14707.4 |
| hypothetical protein | APR52_41115 | Not Available | Positive | 8909177 - 8909848 | 25212.1 |
| hypothetical protein | APR52_41125 | Not Available | Negative | 8912095 - 8912316 | 7886.72 |
| 3-methyladenine dna glycosylase | APR52_41130 | Q2Y9K4 | Positive | 8912507 - 8913070 | 20016.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
