Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate kinase | APR52_41025 | C5CKV9 | Negative | 8885173 - 8885829 | 23646.4 |
| type vi secretion system vgr family protein | APR52_41030 | Not Available | Positive | 8886112 - 8888421 | 85187.6 |
| hypothetical protein | APR52_41035 | Not Available | Positive | 8888424 - 8889452 | 37989.6 |
| hypothetical protein | APR52_41040 | Q9I0F4 | Positive | 8889457 - 8894574 | 188150.0 |
| hypothetical protein | APR52_41045 | Not Available | Positive | 8894633 - 8894917 | 10668.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | APR52_41050 | C5CKW0 | Negative | 8894907 - 8895674 | 26620.9 |
| tetraacyldisaccharide 4'-kinase | APR52_41055 | C5CKW1 | Negative | 8895671 - 8895853 | 6709.14 |
| tetraacyldisaccharide 4'-kinase | APR52_41060 | B9MI83 | Negative | 8895834 - 8896862 | 37208.9 |
| biopolymer transporter exbd | APR52_41065 | Not Available | Negative | 8896864 - 8897289 | 15131.2 |
| flagellar motor protein mota | APR52_41070 | P72604 | Negative | 8897345 - 8897977 | 22568.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
