Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | APR52_40975 | Not Available | Negative | 8874667 - 8875938 | 46328.6 |
| aminoglycoside phosphotransferase | APR52_40980 | Not Available | Negative | 8876111 - 8877199 | 40443.3 |
| crp/fnr family transcriptional regulator | APR52_40985 | Not Available | Negative | 8877201 - 8877920 | 26876.4 |
| enoyl-coa hydratase | APR52_40990 | P77467 | Negative | 8877998 - 8878777 | 27488.7 |
| 3-hydroxyacyl-coa dehydrogenase | APR52_40995 | P76083 | Negative | 8878786 - 8880306 | 54374.4 |
| transporter | APR52_41000 | Q797E3 | Negative | 8880475 - 8881632 | 39928.8 |
| 3-phosphoglycerate dehydrogenase | APR52_41005 | Q58424 | Negative | 8881637 - 8882644 | 36761.5 |
| hypothetical protein | APR52_41010 | Not Available | Negative | 8882829 - 8883212 | 13713.6 |
| lexa family transcriptional regulator | APR52_41015 | C5CKV7 | Negative | 8883390 - 8884064 | 24466.8 |
| l-asparaginase | APR52_41020 | O25424 | Positive | 8884137 - 8885099 | 32926.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
