Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_40920 | Not Available | Negative | 8861273 - 8862247 | 34551.1 |
| gamma-glutamyltransferase | APR52_40925 | A6T9C8 | Positive | 8862489 - 8864045 | 55075.1 |
| inositol monophosphatase | APR52_40930 | P44333 | Negative | 8864060 - 8864893 | 29599.1 |
| luciferase | APR52_40935 | Not Available | Negative | 8864941 - 8865954 | 37088.7 |
| abc transporter atp-binding protein | APR52_40940 | Q2NSR0 | Negative | 8865966 - 8866706 | 26525.2 |
| abc transporter permease | APR52_40945 | Q56992 | Negative | 8866703 - 8867704 | 34138.8 |
| abc transporter substrate-binding protein | APR52_40950 | Not Available | Negative | 8867701 - 8868585 | 31652.1 |
| tonb-dependent receptor | APR52_40955 | A7ML93 | Negative | 8868615 - 8870699 | 76227.9 |
| hypothetical protein | APR52_40960 | Not Available | Negative | 8871215 - 8873446 | 80461.3 |
| gnat family acetyltransferase | APR52_40970 | Not Available | Positive | 8874115 - 8874597 | 17238.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
