Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid-binding protein | APR52_40815 | Not Available | Positive | 8839256 - 8840521 | 44490.0 |
| abc transporter permease | APR52_40820 | Not Available | Positive | 8840638 - 8841579 | 33041.0 |
| branched-chain amino acid abc transporter permease | APR52_40825 | Not Available | Positive | 8841597 - 8842889 | 45024.1 |
| abc transporter atp-binding protein | APR52_40830 | Not Available | Positive | 8842886 - 8843641 | 27765.7 |
| abc transporter atp-binding protein | APR52_40835 | Not Available | Positive | 8843638 - 8844357 | 26313.2 |
| 3-keto-5-aminohexanoate cleavage protein | APR52_40840 | Not Available | Positive | 8844397 - 8845338 | 34366.5 |
| 3-hydroxyacyl-coa dehydrogenase | APR52_40845 | P96825 | Positive | 8845379 - 8846281 | 31814.0 |
| transcriptional regulator | APR52_40850 | P9WMG0 | Positive | 8846579 - 8849455 | 102587.0 |
| hypothetical protein | APR52_40855 | Not Available | Negative | 8849477 - 8850709 | 45949.1 |
| methionine aminopeptidase | APR52_40860 | P0AE20 | Positive | 8850836 - 8851627 | 28680.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
