Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate starvation-inducible protein phoh | APR52_40715 | O07635 | Negative | 8817454 - 8819011 | 56999.1 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | APR52_40720 | Not Available | Positive | 8819054 - 8819518 | 17060.3 |
| hypothetical protein | APR52_40725 | Not Available | Negative | 8819535 - 8820284 | 27743.4 |
| serine acetyltransferase | APR52_40730 | P71405 | Negative | 8820286 - 8821056 | 27418.0 |
| rrna methyltransferase | APR52_40735 | A0A0H2ZF87 | Negative | 8821139 - 8821870 | 26448.0 |
| inositol monophosphatase | APR52_40740 | B4ED80 | Positive | 8822064 - 8823116 | 37416.4 |
| hypothetical protein | APR52_40745 | Not Available | Positive | 8823116 - 8825392 | 81780.1 |
| mechanosensitive ion channel protein mscs | APR52_40750 | Not Available | Positive | 8825389 - 8826483 | 39873.3 |
| hypothetical protein | APR52_40755 | P0AAR6 | Positive | 8826516 - 8826908 | 14240.0 |
| methyltransferase | APR52_40760 | Q45500 | Positive | 8826985 - 8827872 | 32070.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
