Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_03380 | Not Available | Negative | 729946 - 730374 | 15919.5 |
| abc transporter substrate-binding protein | APR52_03385 | O06702 | Negative | 730404 - 731375 | 34137.9 |
| hypothetical protein | APR52_03390 | Not Available | Negative | 731420 - 732295 | 29768.1 |
| hypothetical protein | APR52_03395 | Not Available | Positive | 732494 - 733276 | 28119.0 |
| acetyl-coa acetyltransferase | APR52_03400 | Not Available | Negative | 733315 - 734523 | 43174.9 |
| hypothetical protein | APR52_03405 | Not Available | Negative | 734537 - 735628 | 37598.8 |
| acyl-coa dehydrogenase | APR52_03410 | Not Available | Negative | 735625 - 736785 | 41493.7 |
| hypothetical protein | APR52_03415 | Not Available | Positive | 736888 - 737346 | 16924.6 |
| hypothetical protein | APR52_03425 | Q8KU07 | Positive | 737970 - 738830 | 30049.5 |
| coa-binding protein | APR52_03430 | O29057 | Negative | 738991 - 741120 | 73666.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
