Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major capsid protein | APR52_20755 | Not Available | Negative | 4473395 - 4474444 | 37506.7 |
| Putative peptidase | APR52_20760 | Not Available | Negative | 4474574 - 4475308 | 25014.8 |
| Bbp19 | APR52_20765 | Not Available | Negative | 4475283 - 4475603 | 11801.1 |
| Hypothetical protein | APR52_20770 | Not Available | Negative | 4475799 - 4476110 | 10971.8 |
| hypothetical protein | APR52_20775 | Not Available | Negative | 4476107 - 4476310 | 7095.26 |
| Phage head-tail connector protein | APR52_20780 | Q775C3 | Negative | 4476321 - 4478039 | 63478.5 |
| hypothetical protein | APR52_20785 | Not Available | Negative | 4478039 - 4478344 | 9654.36 |
| Putative phage terminase, large subunit | APR52_20790 | Not Available | Negative | 4478405 - 4479868 | 54369.6 |
| Hypothetical protein | APR52_20795 | Not Available | Negative | 4479939 - 4480469 | 19779.9 |
| hypothetical protein | APR52_20800 | Not Available | Negative | 4480466 - 4480654 | 6888.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
