Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_40665 | Not Available | Positive | 8811509 - 8811967 | 15856.9 |
| 30s ribosomal protein s6 | APR52_40670 | C5CUP0 | Positive | 8812125 - 8812505 | 14476.3 |
| single-stranded dna-binding protein | APR52_40675 | P67674 | Positive | 8812555 - 8812830 | 9855.98 |
| 30s ribosomal protein s18 | APR52_40680 | C5CUP2 | Positive | 8812852 - 8813133 | 11040.5 |
| 50s ribosomal protein l9 | APR52_40685 | C5CUP3 | Positive | 8813148 - 8813600 | 15884.1 |
| replicative dna helicase | APR52_40690 | Q8FB22 | Positive | 8813779 - 8815176 | 51206.3 |
| dna-binding transcriptional regulator | APR52_40695 | Not Available | Negative | 8815187 - 8815963 | 28887.9 |
| transcriptional regulator | APR52_40700 | Not Available | Negative | 8815986 - 8816453 | 17371.2 |
| hypothetical protein | APR52_40705 | Q98GR7 | Negative | 8816476 - 8816925 | 16647.1 |
| glyoxalase | APR52_40710 | Not Available | Negative | 8816932 - 8817303 | 12867.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
