Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate decarboxylase | APR52_40560 | A7B1V0 | Negative | 8786035 - 8787420 | 50133.0 |
| asnc family transcriptional regulator | APR52_40565 | F8DT24 | Positive | 8787608 - 8788108 | 18030.0 |
| multidrug mfs transporter | APR52_40570 | Not Available | Negative | 8788131 - 8789423 | 47204.0 |
| fe(ii)-dependent oxygenase | APR52_40580 | A6T463 | Negative | 8790469 - 8791149 | 25400.3 |
| catecholate siderophore receptor fiu | APR52_40585 | P75780 | Negative | 8791251 - 8793566 | 82987.0 |
| oxidoreductase | APR52_40590 | Q8DCK2 | Negative | 8793857 - 8795218 | 48750.7 |
| thiamine biosynthesis protein apbe | APR52_40595 | A5F5Y3 | Negative | 8795215 - 8796243 | 36166.5 |
| abc transporter permease | APR52_40600 | Not Available | Negative | 8796249 - 8797058 | 28690.0 |
| hypothetical protein | APR52_40605 | Not Available | Negative | 8797106 - 8797639 | 19372.1 |
| hypothetical protein | APR52_40610 | Not Available | Negative | 8797678 - 8798331 | 24336.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
