Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_40510 | Not Available | Positive | 8774850 - 8775068 | 7937.1 |
| phenylacetic acid degradation protein | APR52_40515 | Not Available | Negative | 8775073 - 8775474 | 13869.9 |
| hypothetical protein | APR52_40520 | Not Available | Positive | 8775649 - 8776086 | 15740.8 |
| hypothetical protein | APR52_40525 | Not Available | Positive | 8776083 - 8776403 | 11819.2 |
| oxidoreductase | APR52_40530 | Q5HGK2 | Negative | 8776424 - 8777080 | 22247.8 |
| alpha/beta hydrolase | APR52_40535 | Not Available | Negative | 8777165 - 8777977 | 27524.2 |
| atpase | APR52_40540 | Not Available | Positive | 8778336 - 8783456 | 183497.0 |
| luxr family transcriptional regulator | APR52_40545 | P15940 | Positive | 8783453 - 8784157 | 25405.8 |
| response regulator receiver protein | APR52_40550 | P26487 | Positive | 8784259 - 8784648 | 14292.1 |
| histidine kinase | APR52_40555 | Q9HZ47 | Positive | 8784812 - 8785843 | 36905.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
