Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_40410 | Not Available | Positive | 8756177 - 8756641 | 15869.1 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | APR52_40415 | Q21V41 | Positive | 8756638 - 8757084 | 15921.4 |
| hypothetical protein | APR52_40420 | Not Available | Positive | 8757290 - 8757790 | 17356.6 |
| peptidylprolyl isomerase | APR52_40425 | Not Available | Negative | 8757866 - 8758390 | 18964.3 |
| cupin | APR52_40430 | P27431 | Positive | 8758405 - 8759547 | 41747.0 |
| hypothetical protein | APR52_40435 | Not Available | Positive | 8759555 - 8760052 | 18606.0 |
| energy transducer tonb | APR52_40440 | Not Available | Positive | 8760236 - 8760739 | 17461.8 |
| hypothetical protein | APR52_40445 | Not Available | Positive | 8760868 - 8761740 | 30277.8 |
| biopolymer transporter exbd | APR52_40450 | Not Available | Positive | 8761829 - 8762263 | 15594.1 |
| biopolymer transporter exbd | APR52_40455 | B0RLE7 | Positive | 8762272 - 8762700 | 15272.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
