Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR52_40360 | P94501 | Negative | 8746697 - 8747587 | 32699.7 |
| hypothetical protein | APR52_40365 | Not Available | Positive | 8747770 - 8748630 | 29927.6 |
| hypothetical protein | APR52_40370 | Not Available | Negative | 8748631 - 8749608 | 35411.3 |
| atpase | APR52_40375 | Not Available | Negative | 8749730 - 8750425 | 24931.5 |
| transporter | APR52_40380 | P24520 | Negative | 8750422 - 8751042 | 22704.1 |
| septation ring formation regulator ezra | APR52_40385 | B2VFZ8 | Negative | 8751098 - 8751376 | 10348.7 |
| enolase | APR52_40390 | C5CSV6 | Negative | 8751493 - 8752776 | 45727.5 |
| hypothetical protein | APR52_40395 | Not Available | Negative | 8752805 - 8753095 | 10634.8 |
| ctp synthetase | APR52_40400 | C5CSV3 | Negative | 8753092 - 8754774 | 61727.9 |
| phosphopantothenate synthase | APR52_40405 | Q9KVD1 | Positive | 8754954 - 8756177 | 43654.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
