Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | APR52_40260 | P0AEQ8 | Negative | 8729167 - 8729937 | 28884.8 |
| abc transporter substrate-binding protein | APR52_40265 | Q06758 | Negative | 8730029 - 8730799 | 27406.9 |
| transporter | APR52_40270 | Not Available | Negative | 8730816 - 8731469 | 23289.1 |
| abc transporter substrate-binding protein | APR52_40275 | Not Available | Positive | 8731571 - 8732545 | 34030.2 |
| recombinase xerd | APR52_40280 | Q8XWD0 | Positive | 8732619 - 8733530 | 33904.3 |
| lysr family transcriptional regulator | APR52_40285 | Q9F1R2 | Negative | 8733540 - 8734439 | 33556.8 |
| phosphonate abc transporter substrate-binding protein | APR52_40290 | A0QQ71 | Positive | 8734663 - 8735526 | 31140.6 |
| phosphonate abc transporter atp-binding protein | APR52_40295 | Not Available | Positive | 8735523 - 8736353 | 30286.8 |
| phosphate abc transporter permease | APR52_40300 | Not Available | Positive | 8736380 - 8737171 | 28295.2 |
| abc transporter substrate-binding protein | APR52_40305 | Not Available | Positive | 8737267 - 8738247 | 34298.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
