Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,4-dienoyl-coa reductase | APR52_03330 | Not Available | Positive | 719382 - 720269 | 31192.5 |
| hypothetical protein | APR52_03335 | Not Available | Positive | 720302 - 720793 | 17867.6 |
| hypothetical protein | APR52_03340 | Q9F7E0 | Positive | 720804 - 721592 | 26548.1 |
| hypothetical protein | APR52_03345 | Q3ZBF6 | Positive | 721603 - 722760 | 42567.2 |
| enoyl-coa hydratase | APR52_03350 | A4YI89 | Positive | 722959 - 723684 | 25744.5 |
| butyryl-coa dehydrogenase | APR52_03355 | K4L7X3 | Positive | 723705 - 724877 | 42559.2 |
| hypothetical protein | APR52_03360 | Not Available | Positive | 724948 - 726531 | 58045.6 |
| mbl fold metallo-hydrolase | APR52_03365 | Not Available | Positive | 726693 - 727766 | 39959.7 |
| carnitine dehydratase | APR52_03370 | Not Available | Negative | 727795 - 729033 | 43845.7 |
| hypothetical protein | APR52_03375 | Not Available | Negative | 729026 - 729949 | 33038.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
