Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | APR52_40160 | Not Available | Positive | 8708766 - 8709770 | 35889.0 |
| mfs transporter | APR52_40165 | Not Available | Positive | 8709774 - 8710946 | 40182.4 |
| gntr family transcriptional regulator | APR52_40170 | Not Available | Positive | 8710987 - 8711796 | 29302.9 |
| 3-hydroxyisobutyrate dehydrogenase | APR52_40175 | Q0KBC7 | Positive | 8711892 - 8712815 | 31373.8 |
| nad-dependent epimerase | APR52_40180 | Q0KBD2 | Positive | 8712821 - 8713834 | 35332.4 |
| hypothetical protein | APR52_40185 | A0A0H3KP73 | Positive | 8713838 - 8715109 | 43372.5 |
| aldolase | APR52_40190 | Q0KBC9 | Positive | 8715307 - 8715981 | 24234.9 |
| hydroxypyruvate isomerase | APR52_40195 | Not Available | Positive | 8716027 - 8716845 | 30392.0 |
| amidohydrolase | APR52_40200 | Not Available | Positive | 8716842 - 8718035 | 42836.1 |
| enamine deaminase rida | APR52_40205 | Not Available | Positive | 8718032 - 8718496 | 16918.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
