Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent chaperone clpb | APR52_40055 | Q8XZR0 | Positive | 8683062 - 8685701 | 96357.7 |
| hypothetical protein | APR52_40060 | Not Available | Positive | 8685708 - 8686040 | 12038.8 |
| long-chain fatty acid--coa ligase | APR52_40065 | Not Available | Negative | 8686119 - 8687933 | 66530.4 |
| abc transporter atp-binding protein | APR52_40070 | Not Available | Negative | 8687930 - 8688748 | 29478.6 |
| amino acid abc transporter substrate-binding protein | APR52_40075 | Not Available | Negative | 8688762 - 8689952 | 42778.8 |
| abc transporter permease | APR52_40080 | Not Available | Negative | 8689967 - 8691004 | 37538.4 |
| abc transporter permease | APR52_40085 | Not Available | Negative | 8691315 - 8692193 | 30471.7 |
| abc transporter atp-binding protein | APR52_40090 | Not Available | Negative | 8692193 - 8693086 | 32233.1 |
| tetr family transcriptional regulator | APR52_40095 | Not Available | Positive | 8693296 - 8694006 | 26202.8 |
| enoyl-coa hydratase | APR52_40100 | Not Available | Positive | 8694034 - 8694828 | 27413.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
