Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase | APR52_40005 | P0A960 | Positive | 8673101 - 8674333 | 45454.7 |
| hypothetical protein | APR52_40010 | Not Available | Positive | 8674330 - 8675367 | 36027.7 |
| homoserine dehydrogenase | APR52_40015 | P29365 | Positive | 8675382 - 8676704 | 46544.6 |
| threonine synthase | APR52_40020 | P37145 | Positive | 8676701 - 8678116 | 51837.7 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobb | APR52_40025 | P44902 | Positive | 8678198 - 8678737 | 20109.9 |
| molybdenum cofactor biosynthesis protein moaa | APR52_40030 | P12281 | Positive | 8678730 - 8680028 | 45561.9 |
| molybdenum cofactor biosynthesis protein moad | APR52_40035 | Not Available | Positive | 8680034 - 8680285 | 8814.54 |
| 4-hydroxy-tetrahydrodipicolinate synthase | APR52_40040 | Not Available | Negative | 8680272 - 8681174 | 31141.6 |
| molybdenum cofactor biosynthesis protein moae | APR52_40045 | Q8XZR3 | Positive | 8681438 - 8681917 | 17497.8 |
| twin-arginine translocation pathway signal | APR52_40050 | Not Available | Negative | 8681924 - 8682919 | 34975.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
