Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m50 | APR52_39905 | Not Available | Positive | 8652436 - 8653164 | 26489.9 |
| enoyl-coa hydratase | APR52_39910 | P24162 | Negative | 8653178 - 8653966 | 27079.8 |
| 3-oxoacyl-acp reductase | APR52_39915 | Not Available | Negative | 8653968 - 8654798 | 28879.7 |
| dehydratase | APR52_39920 | Not Available | Negative | 8654826 - 8655245 | 15183.3 |
| acyl dehydratase | APR52_39925 | Q82DR8 | Negative | 8655260 - 8655700 | 15967.0 |
| lipid-transfer protein | APR52_39930 | P22307 | Negative | 8655715 - 8656899 | 41507.7 |
| fatty-acid--coa ligase | APR52_39935 | Not Available | Negative | 8656938 - 8658500 | 56080.6 |
| arac family transcriptional regulator | APR52_39940 | Not Available | Positive | 8658679 - 8659731 | 38039.2 |
| arsr family transcriptional regulator | APR52_39945 | Q58958 | Positive | 8659782 - 8660366 | 22543.2 |
| cytochrome bd biosynthesis protein | APR52_39950 | Q2YKD6 | Negative | 8660506 - 8660655 | 5749.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
