Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | APR52_39850 | P44629 | Negative | 8643716 - 8644912 | 42914.2 |
| chorismate synthase | APR52_39855 | C5CS25 | Negative | 8644912 - 8646024 | 39434.7 |
| hypothetical protein | APR52_39860 | Not Available | Negative | 8646100 - 8646285 | 6823.26 |
| mfs transporter | APR52_39865 | Not Available | Negative | 8646340 - 8647887 | 52537.9 |
| hypothetical protein | APR52_39870 | Q52996 | Negative | 8647884 - 8648240 | 12916.3 |
| dehydrogenase | APR52_39875 | Not Available | Negative | 8648237 - 8648608 | 13494.1 |
| rna polymerase subunit sigma-24 | APR52_39880 | Q52997 | Negative | 8648700 - 8649956 | 45918.0 |
| atpase | APR52_39885 | Not Available | Negative | 8649953 - 8650429 | 17901.1 |
| arsr family transcriptional regulator | APR52_39890 | Not Available | Negative | 8650318 - 8650782 | 16938.3 |
| cupin | APR52_39895 | Not Available | Positive | 8650907 - 8651329 | 15765.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
