Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | APR52_39750 | Not Available | Positive | 8625256 - 8626218 | 34363.9 |
| 4-hydroxybenzoyl-coa thioesterase | APR52_39755 | P37504 | Positive | 8626253 - 8627113 | 31978.4 |
| hypothetical protein | APR52_39760 | Not Available | Negative | 8627121 - 8628020 | 32198.8 |
| folate-binding protein | APR52_39765 | C5BAS5 | Negative | 8628236 - 8629168 | 31832.4 |
| aminodeoxychorismate lyase | APR52_39770 | P44720 | Positive | 8629322 - 8630344 | 36953.4 |
| thymidylate kinase | APR52_39775 | Q21W76 | Positive | 8630341 - 8631003 | 23726.2 |
| dna polymerase | APR52_39780 | P52024 | Positive | 8631000 - 8632013 | 36115.5 |
| pilus assembly protein pilz | APR52_39785 | Not Available | Positive | 8632010 - 8632426 | 14343.1 |
| dnaase | APR52_39790 | P0AFQ9 | Positive | 8632501 - 8633307 | 29862.3 |
| hypothetical protein | APR52_39795 | Not Available | Positive | 8633307 - 8633972 | 23956.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
