Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription accessory protein | APR52_39700 | P46837 | Positive | 8611510 - 8613879 | 86118.7 |
| phospholipase | APR52_39705 | Not Available | Positive | 8613918 - 8614991 | 40014.9 |
| mfs transporter | APR52_39710 | Not Available | Positive | 8615095 - 8616087 | 34616.9 |
| type vi secretion protein | APR52_39715 | Not Available | Negative | 8616110 - 8616496 | 13435.7 |
| hypothetical protein | APR52_39720 | Not Available | Negative | 8616542 - 8617219 | 24217.1 |
| low-complexity protein | APR52_39725 | Not Available | Negative | 8617216 - 8618349 | 41138.9 |
| hypothetical protein | APR52_39730 | Not Available | Negative | 8618346 - 8621003 | 98101.5 |
| hypothetical protein | APR52_39735 | Not Available | Negative | 8621018 - 8621455 | 15912.4 |
| type vi secretion protein vgr | APR52_39740 | Not Available | Negative | 8621468 - 8623813 | 86478.9 |
| 4-hydroxybutyrate dehydrogenase | APR52_39745 | Q59104 | Negative | 8623980 - 8625116 | 40032.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
