Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclohexanecarboxyl-coa dehydrogenase | APR52_03280 | Not Available | Positive | 708482 - 709648 | 42374.2 |
| enoyl-coa hydratase | APR52_03285 | Not Available | Positive | 709645 - 710433 | 28343.1 |
| hydroxymethylglutaryl-coa lyase | APR52_03290 | P38060 | Positive | 710450 - 711427 | 35527.6 |
| hypothetical protein | APR52_03295 | Not Available | Positive | 711540 - 712706 | 39990.0 |
| methylcrotonoyl-coa carboxylase | APR52_03300 | Not Available | Positive | 712841 - 714418 | 56533.5 |
| enoyl-coa hydratase | APR52_03305 | C5NN19 | Positive | 714429 - 715226 | 28211.2 |
| 3-methylcrotonyl-coa carboxylase | APR52_03310 | P0A509 | Positive | 715237 - 717258 | 71247.3 |
| acyl-coa dehydrogenase | APR52_03315 | P51174 | Positive | 717255 - 718400 | 42007.2 |
| thioesterase | APR52_03320 | Not Available | Positive | 718439 - 718930 | 17750.6 |
| thioesterase | APR52_03325 | Not Available | Positive | 718927 - 719385 | 16678.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
