Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein tade | APR52_39645 | Not Available | Positive | 8596894 - 8597397 | 17959.8 |
| hypothetical protein | APR52_39650 | Not Available | Positive | 8597394 - 8597891 | 17715.4 |
| hypothetical protein | APR52_39655 | Not Available | Positive | 8597905 - 8599926 | 69445.4 |
| fis family transcriptional regulator | APR52_39660 | Q00934 | Positive | 8599943 - 8601379 | 52311.5 |
| transporter | APR52_39665 | Not Available | Negative | 8601425 - 8602984 | 56751.9 |
| secretion protein hyld | APR52_39670 | Q7ANN5 | Negative | 8602981 - 8604297 | 47960.5 |
| abc transporter | APR52_39675 | Q46717 | Negative | 8604378 - 8606192 | 65223.6 |
| hypothetical protein | APR52_39680 | Not Available | Negative | 8606276 - 8606569 | 10608.9 |
| mur ligase | APR52_39685 | O33804 | Negative | 8606566 - 8609679 | 114031.0 |
| hypothetical protein | APR52_39690 | Q51886 | Negative | 8609782 - 8610288 | 18400.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
