Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein | APR52_39595 | Not Available | Positive | 8587759 - 8587956 | 6797.37 |
| peptidase a24 | APR52_39600 | Not Available | Positive | 8587960 - 8588463 | 18117.6 |
| pilus assembly protein cpab | APR52_39605 | Not Available | Positive | 8588535 - 8589524 | 34033.2 |
| hypothetical protein | APR52_39610 | P55702 | Positive | 8589579 - 8590937 | 47238.9 |
| histidine kinase | APR52_39615 | Not Available | Positive | 8590973 - 8592259 | 45569.4 |
| pilus assembly protein cpaf | APR52_39620 | P9WMT2 | Positive | 8592267 - 8593580 | 48697.4 |
| secretion system protein | APR52_39625 | Not Available | Positive | 8593573 - 8594562 | 35312.8 |
| secretion system protein | APR52_39630 | Not Available | Positive | 8594559 - 8595527 | 35737.1 |
| hypothetical protein | APR52_39635 | Not Available | Positive | 8595524 - 8596471 | 33371.5 |
| hypothetical protein | APR52_39640 | Not Available | Positive | 8596468 - 8596866 | 14113.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
