Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_39545 | Not Available | Positive | 8574976 - 8575782 | 28921.7 |
| hypothetical protein | APR52_39550 | Not Available | Positive | 8575779 - 8576264 | 17187.7 |
| hypothetical protein | APR52_39555 | Q9ZGR8 | Negative | 8576358 - 8578487 | 76642.2 |
| transposase | APR52_39560 | Not Available | Negative | 8579532 - 8579912 | 13832.5 |
| hydroxyquinol 1,2-dioxygenase | APR52_39565 | Not Available | Negative | 8580214 - 8581221 | 37934.6 |
| hydroxyquinol 1,2-dioxygenase | APR52_39570 | Not Available | Negative | 8581248 - 8581778 | 19788.4 |
| lysr family transcriptional regulator | APR52_39575 | Not Available | Negative | 8581909 - 8582853 | 35033.4 |
| hypothetical protein | APR52_39580 | P25737 | Positive | 8582949 - 8584496 | 54701.4 |
| hypothetical protein | APR52_39585 | Not Available | Positive | 8584657 - 8585808 | 39868.4 |
| hypothetical protein | APR52_39590 | Not Available | Positive | 8585775 - 8587346 | 56614.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
