Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphofructokinase | APR52_39395 | Q609I3 | Positive | 8544815 - 8546077 | 45333.0 |
| hypothetical protein | APR52_39400 | Not Available | Positive | 8546077 - 8546298 | 7802.36 |
| dna polymerase iii subunit gamma/tau | APR52_39405 | P9WL94 | Negative | 8546286 - 8547635 | 49344.9 |
| hypothetical protein | APR52_39410 | Not Available | Negative | 8547791 - 8548174 | 14261.2 |
| hypothetical protein | APR52_39415 | Not Available | Positive | 8548632 - 8549810 | 42872.3 |
| integrase | APR52_39420 | Not Available | Positive | 8549947 - 8550981 | 38075.3 |
| hypothetical protein | APR52_39425 | Not Available | Positive | 8551398 - 8551688 | 10800.4 |
| hypothetical protein | APR52_39430 | P59928 | Negative | 8552439 - 8552963 | 19357.9 |
| hypothetical protein | APR52_39435 | Q2YJ82 | Negative | 8553052 - 8554122 | 39911.0 |
| hypothetical protein | APR52_39440 | Q6FYW1 | Negative | 8554125 - 8555366 | 43503.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
