Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase | APR52_39345 | Q46Y48 | Negative | 8535184 - 8536173 | 34451.1 |
| malate synthase g | APR52_39350 | C5CJB5 | Positive | 8536472 - 8538646 | 77928.3 |
| mfs transporter | APR52_39355 | Not Available | Positive | 8538741 - 8539961 | 42834.4 |
| hypothetical protein | APR52_39360 | Not Available | Negative | 8539977 - 8540753 | 30408.3 |
| hypothetical protein | APR52_39365 | Not Available | Negative | 8540756 - 8540971 | 7955.51 |
| fasciclin | APR52_39370 | Not Available | Positive | 8541415 - 8541987 | 18924.4 |
| lysr family transcriptional regulator | APR52_39375 | Not Available | Negative | 8542009 - 8542965 | 34768.0 |
| hypothetical protein | APR52_39380 | Not Available | Positive | 8543047 - 8543364 | 11382.7 |
| enoyl-coa hydratase | APR52_39385 | Not Available | Positive | 8543518 - 8544345 | 29798.0 |
| steroid delta-isomerase | APR52_39390 | Not Available | Positive | 8544395 - 8544742 | 13133.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
