Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine--trna ligase | APR52_39295 | A1VTL9 | Negative | 8524308 - 8525993 | 61420.8 |
| hypothetical protein | APR52_39300 | Not Available | Positive | 8526125 - 8526469 | 10860.2 |
| hypothetical protein | APR52_39305 | Not Available | Negative | 8526523 - 8528553 | 73895.4 |
| hypothetical protein | APR52_39310 | Not Available | Negative | 8528558 - 8529013 | 16643.2 |
| lysr family transcriptional regulator | APR52_39315 | Not Available | Negative | 8529084 - 8530010 | 33667.3 |
| laci family transcriptional regulator | APR52_39320 | Not Available | Negative | 8530075 - 8531067 | 34219.6 |
| coa-transferase | APR52_39325 | Not Available | Negative | 8531072 - 8532262 | 43049.1 |
| 3-hydroxy-3-methylglutaryl-coa lyase | APR52_39330 | O34873 | Negative | 8532255 - 8533190 | 32458.3 |
| iclr family transcriptional regulator | APR52_39335 | Not Available | Positive | 8533285 - 8534025 | 26573.7 |
| abc transporter substrate-binding protein | APR52_39340 | Not Available | Negative | 8534142 - 8535110 | 33572.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
