Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b | APR52_39245 | Not Available | Positive | 8515221 - 8515830 | 22256.7 |
| polyisoprenoid-binding protein | APR52_39250 | Not Available | Positive | 8515827 - 8516411 | 20610.9 |
| hypothetical protein | APR52_39255 | Not Available | Positive | 8516445 - 8517086 | 22832.3 |
| threonine transporter | APR52_39260 | Not Available | Positive | 8517109 - 8517753 | 21766.2 |
| phospholipase | APR52_39265 | Not Available | Negative | 8517763 - 8519361 | 58978.8 |
| rna polymerase sigma-54 factor | APR52_39270 | P28615 | Negative | 8519372 - 8520961 | 58545.9 |
| abc transporter atp-binding protein | APR52_39275 | Not Available | Negative | 8520992 - 8521786 | 29025.2 |
| organic solvent tolerance protein osta | APR52_39280 | Not Available | Negative | 8521783 - 8522496 | 24864.2 |
| disulfide bond formation protein dsba | APR52_39285 | Not Available | Negative | 8522696 - 8523343 | 23241.8 |
| sporulation protein | APR52_39290 | Not Available | Negative | 8523532 - 8524296 | 25948.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
