Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose oxidase | APR52_39195 | Not Available | Negative | 8504662 - 8505780 | 39698.7 |
| lytic transglycosylase | APR52_39200 | O31608 | Negative | 8505845 - 8506759 | 32098.7 |
| dna topoisomerase iv subunit b | APR52_39205 | P0A2I6 | Negative | 8506771 - 8508765 | 72235.1 |
| hypothetical protein | APR52_39210 | Not Available | Negative | 8508912 - 8509364 | 15826.1 |
| hypothetical protein | APR52_39215 | Not Available | Negative | 8509361 - 8509780 | 15050.2 |
| mfs transporter | APR52_39220 | Not Available | Positive | 8509971 - 8511200 | 43476.8 |
| sam-dependent methyltransferase | APR52_39225 | Not Available | Positive | 8511406 - 8511987 | 20220.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | APR52_39230 | B9MER6 | Positive | 8512121 - 8512969 | 30442.8 |
| hypothetical protein | APR52_39235 | Q3SJU7 | Positive | 8513128 - 8514210 | 39752.0 |
| mbl fold metallo-hydrolase | APR52_39240 | C0SP91 | Positive | 8514216 - 8514992 | 27924.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
