Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_03230 | Q06319 | Negative | 698043 - 699200 | 41887.8 |
| hypothetical protein | APR52_03235 | Not Available | Negative | 699253 - 700410 | 42145.6 |
| hypothetical protein | APR52_03240 | Not Available | Negative | 700435 - 700899 | 16096.4 |
| carnitine dehydratase | APR52_03245 | Not Available | Positive | 701133 - 702308 | 41331.9 |
| acetyl-coa acetyltransferase | APR52_03250 | Not Available | Negative | 702397 - 703635 | 45147.4 |
| short-chain dehydrogenase | APR52_03255 | Q9WVK3 | Negative | 703632 - 704513 | 31423.6 |
| short-chain dehydrogenase | APR52_03260 | Not Available | Negative | 704510 - 705415 | 32295.5 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | APR52_03265 | Q9HZP5 | Negative | 705402 - 707075 | 60396.3 |
| acyl dehydratase | APR52_03270 | Not Available | Negative | 707115 - 707621 | 18825.3 |
| tetr family transcriptional regulator | APR52_03275 | Q0S7V2 | Negative | 707628 - 708251 | 23165.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
