Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine abc transporter atp-binding protein | APR52_39145 | Not Available | Negative | 8494289 - 8495032 | 26649.9 |
| glutamine abc transporter atp-binding protein | APR52_39150 | Q52815 | Negative | 8495032 - 8495784 | 27745.8 |
| abc transporter substrate-binding protein | APR52_39155 | Not Available | Negative | 8495953 - 8496750 | 28108.0 |
| amino acid abc transporter permease | APR52_39160 | Not Available | Negative | 8496825 - 8497478 | 23529.3 |
| abc transporter permease | APR52_39165 | Q68XN8 | Negative | 8497506 - 8498177 | 24843.9 |
| hypothetical protein | APR52_39170 | Not Available | Positive | 8498355 - 8500067 | 64842.4 |
| isochorismatase | APR52_39175 | P0ADI8 | Negative | 8500215 - 8500751 | 19358.8 |
| mbl fold metallo-hydrolase | APR52_39180 | Not Available | Positive | 8500904 - 8502019 | 41678.5 |
| hypothetical protein | APR52_39185 | Not Available | Negative | 8502027 - 8502215 | 6965.53 |
| dna topoisomerase iv | APR52_39190 | P48374 | Negative | 8502215 - 8504614 | 86189.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
