Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR52_39090 | Not Available | Positive | 8484451 - 8485263 | 28380.6 |
| hypothetical protein | APR52_39100 | O96876 | Positive | 8486331 - 8486789 | 15800.2 |
| cytochrome c | APR52_39105 | P00103 | Positive | 8486843 - 8487130 | 10439.6 |
| (2fe-2s)-binding protein | APR52_39110 | Not Available | Positive | 8487145 - 8487474 | 11723.1 |
| hypothetical protein | APR52_39115 | Not Available | Negative | 8487504 - 8487686 | 6727.63 |
| hypothetical protein | APR52_39120 | Not Available | Negative | 8487837 - 8489408 | 56767.9 |
| glucose-methanol-choline oxidoreductase | APR52_39125 | Not Available | Positive | 8489647 - 8491392 | 61990.0 |
| dehydrogenase | APR52_39130 | A0A167V873 | Negative | 8491283 - 8492317 | 36404.6 |
| d-glycerate dehydrogenase | APR52_39135 | A8ARD9 | Negative | 8492314 - 8493312 | 35403.6 |
| 2-dehydro-3-deoxygluconokinase | APR52_39140 | P50845 | Negative | 8493318 - 8494271 | 33827.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
