Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase | APR52_38990 | Not Available | Negative | 8466259 - 8467323 | 36053.6 |
| hypothetical protein | APR52_38995 | Q8XVA0 | Negative | 8467320 - 8468093 | 27775.1 |
| mfs transporter permease | APR52_39000 | P40862 | Negative | 8468090 - 8469442 | 48120.6 |
| 2-alkenal reductase | APR52_39005 | P18584 | Positive | 8469751 - 8470914 | 40413.4 |
| twin-arginine protein translocation system subunit tatc | APR52_39010 | D0KWI6 | Negative | 8471009 - 8471818 | 29475.9 |
| preprotein translocase | APR52_39015 | Q12FC1 | Negative | 8471900 - 8472361 | 17015.7 |
| preprotein translocase subunit tata | APR52_39020 | C5CQK5 | Negative | 8472374 - 8472619 | 8491.25 |
| hit family hydrolase | APR52_39025 | O66536 | Negative | 8472682 - 8473041 | 13160.0 |
| hypothetical protein | APR52_39030 | Not Available | Negative | 8473031 - 8473420 | 14689.2 |
| phosphoribosyl-atp pyrophosphatase | APR52_39035 | C5CQK2 | Negative | 8473468 - 8473848 | 13573.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
