Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 2-epimerase | APR52_38940 | G3XD61 | Negative | 8450510 - 8451577 | 38762.9 |
| glycosyl transferase | APR52_38945 | Not Available | Negative | 8453321 - 8454460 | 42524.4 |
| exsb family protein | APR52_38950 | Not Available | Negative | 8455787 - 8456935 | 44809.6 |
| glycosyl amidation-associated protein wbuz | APR52_38955 | P72139 | Negative | 8456944 - 8457714 | 27415.5 |
| imidazole glycerol phosphate synthase subunit hish | APR52_38960 | P72138 | Negative | 8457715 - 8458332 | 22680.6 |
| aminotransferase degt | APR52_38965 | Q9HZ76 | Negative | 8459673 - 8460794 | 40193.2 |
| serine acetyltransferase | APR52_38970 | G3XD01 | Negative | 8460794 - 8461384 | 21044.2 |
| oxidoreductase | APR52_38975 | G3XD23 | Negative | 8461402 - 8462349 | 35630.5 |
| vi polysaccharide biosynthesis protein vipa/tvib | APR52_38980 | Q04972 | Negative | 8462379 - 8463680 | 47398.9 |
| large-conductance mechanosensitive channel | APR52_38985 | C5CQL2 | Positive | 8465790 - 8466221 | 15341.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
