Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase | APR52_38890 | A4JPX9 | Positive | 8440219 - 8441019 | 28170.4 |
| acetaldehyde dehydrogenase (acetylating) | APR52_38895 | A4JPX8 | Positive | 8441037 - 8441990 | 33046.9 |
| 4-hydroxy-2-oxovalerate aldolase | APR52_38900 | Q0K3S5 | Positive | 8442001 - 8443047 | 36969.0 |
| hypothetical protein | APR52_38905 | Not Available | Negative | 8444033 - 8444302 | 10170.7 |
| hypothetical protein | APR52_38910 | Not Available | Negative | 8444608 - 8444958 | 12844.9 |
| cell division protein zipa | APR52_38915 | Not Available | Positive | 8445541 - 8446062 | 18956.5 |
| acetyltransferase | APR52_38920 | Not Available | Negative | 8447163 - 8447705 | 18296.3 |
| udp-phosphate galactose phosphotransferase | APR52_38925 | Q56770 | Negative | 8447722 - 8448282 | 21266.3 |
| hypothetical protein | APR52_38930 | Q56623 | Negative | 8448266 - 8449219 | 34190.9 |
| lipopolysaccharides biosynthesis glycosyltransferase | APR52_38935 | Not Available | Negative | 8449266 - 8450510 | 46610.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
