Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_38840 | Not Available | Positive | 8428228 - 8429169 | 32706.8 |
| hypothetical protein | APR52_38845 | Not Available | Positive | 8429494 - 8430459 | 35158.9 |
| hypothetical protein | APR52_38850 | Not Available | Positive | 8430568 - 8431536 | 33970.0 |
| group ii intron reverse transcriptase/maturase | APR52_38855 | Q47688 | Positive | 8431964 - 8433340 | 51622.5 |
| peptidase s15 | APR52_38860 | Not Available | Positive | 8433555 - 8435312 | 64591.2 |
| 3-keto-5-aminohexanoate cleavage protein | APR52_38865 | B0VHH0 | Positive | 8435338 - 8436267 | 33688.7 |
| sugar dehydrogenase | APR52_38870 | P52037 | Positive | 8436278 - 8437024 | 25768.8 |
| hypothetical protein | APR52_38875 | Not Available | Positive | 8437026 - 8437379 | 13401.2 |
| hypothetical protein | APR52_38880 | Not Available | Positive | 8437382 - 8438095 | 26633.8 |
| acyl-coa synthetase | APR52_38885 | M4IS88 | Positive | 8438187 - 8439824 | 60219.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
