Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR52_38790 | P35114 | Negative | 8417869 - 8418552 | 25406.6 |
| cyclase | APR52_38795 | Not Available | Negative | 8418559 - 8419629 | 39171.9 |
| hypothetical protein | APR52_38800 | Not Available | Positive | 8419837 - 8420712 | 31871.5 |
| lysr family transcriptional regulator | APR52_38805 | Not Available | Positive | 8421118 - 8422023 | 32851.6 |
| 3-keto-5-aminohexanoate cleavage protein | APR52_38810 | E3PRK0 | Positive | 8422330 - 8423265 | 33717.6 |
| hypothetical protein | APR52_38815 | Q0QLF3 | Positive | 8423279 - 8423743 | 16317.8 |
| hypothetical protein | APR52_38820 | Not Available | Positive | 8423740 - 8425890 | 76284.8 |
| hypothetical protein | APR52_38825 | Not Available | Positive | 8425908 - 8426876 | 33996.2 |
| hypothetical protein | APR52_38830 | Not Available | Positive | 8426891 - 8427250 | 13757.7 |
| hypothetical protein | APR52_38835 | B5XYH0 | Positive | 8427300 - 8428121 | 29110.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
